rs51451208 SNP Detail

Summary

• ID
  rs51451208
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:51294427 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTCA GTTGTTGGTT ATGCACTGCC
  Y
  GGGGTGAGGG CCAACCAGGG AGGGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135173166	ENSMUSSNP2217104	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
ss320762588	CHEV_3_51190928	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51451208					SNP	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:51294427 () rs orientation: forward

Symbol	Name	Function Class
Gm5103	predicted gene 5103	682 bp downstream
Mgarp	mitochondria localized glutamic acid rich protein	1406 bp downstream
Rr576306	regulatory region 576306	within coordinates
Rr576307	regulatory region 576307	950 bp proximal