rs51373199 SNP Detail

Summary

• ID
  rs51373199
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:137719102 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCCTTATC TCTTTCAGAA
  CAAGCCCTGG CTCCAGCTTT AAGTTTCCTG ATCTGATTTT TCTCTCCAGA CTGTCTATTT
  CATATTTTTT TGGCCCCACT TTTCTCATTA TAGACCATCA TAAGAGTAAT AGTTAATCAT
  ATCACGATGG AGTTGGTATT AGTCTGTCTT GAAATTTCTG CCAAAGAAGT AATTAGCCCA
  Y
  GACTTTAAAA TTGGCCTCAG GTAAGTTCTC AGGACAAGAC CAGAAAACAG CCACATTCCT
  GATCAAAATC ATCACAAGAG TGGTCTCCAG ACTAGTCGCT GACAGTGTTC CCTCCAGAAA
  CCCATCTTCC AAGTTCCCAC TAGGATGACC TCTGTTTACA GCATTCAGAT GCTTTTCTAG
  TCTAAAGTCT GAATGCCCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135946663	ENSMUSSNP795185	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
ss320977694	CHEV_3_137676305	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51373199					SNP	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137719102 () rs orientation: forward

Symbol	Name	Function Class
Gm19708	predicted gene, 19708	within coordinates
Rr586058	regulatory region 586058	1343 bp proximal