rs51189848 SNP Detail

Summary

• ID
  rs51189848
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:101040581 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATGTTTTGT ATTGAATCGT TTTTTACAAT GGATAAACAA
  GCACTCAGAA TCTCTGTTAT GTGAAGGGTT TGGTGGGAAA TGGGAAGGGA TCTTGAAGTC
  C
  CCAGGACAGG GCATTTTTCC TTTAGCCTAG GGGTTTCTTA GGGACTGAGA GAGAGTCAGA
  AGAAATTTAT CTCAGGCGTT CTACAGGATC CAGCTGTGT                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss133429379	ENSMUSSNP3321260	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss321872864	CHEV_6_101013614	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51189848					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:101040581 () rs orientation: forward

Symbol	Name	Function Class
Gm43948	predicted gene, 43948	within coordinates
Gm43950	predicted gene, 43950	within coordinates
Rr635751	regulatory region 635751	434 bp proximal