rs51114061 SNP Detail

Summary

• ID
  rs51114061
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:16717205 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCACTGCCG GAGCAAGTGC
  AGCCGCCACT GCCACATCCT GGTCTTTAAC TCTGTCACAG GGCACAGGGC GACCTCTGGG
  CCAGCCATAA GAAGGACCTA TTTCACCTGC GAGTCGCCAC CCCAACACTC ACAAGGGTGG
  CAGCAGCAGG TGGGAGACCA GTGACCTCGG GTCCACAGAG ATTGCCAAAG GCCACCGGCA
  K
  CGCAGGGGAA GTCTGCATCT TCAAACTCTC CTTGGAGCAA CCTTGCCTAA GACCTGGGAG
  CCACGACTAC TCAGCTCCAA TTCCGTGGCT GACGTGAGTC ACTCGCAGGG GGCAGGCTGC
  AGACGGCTGG GCTGGGCAGG GGTCCTCTTG ACTGAGTTGG ACCAATTGGG ACTATCGGTA
  GCCTCACCTG TGAGGCCTTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148401910	ENSMUSSNP6919777	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51114061					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16717205 () rs orientation: forward

Symbol	Name	Function Class
Pnma8c	PNMA family member 8C	mRNA-UTR
Rr642835	regulatory region 642835	184 bp distal
Tssr64666	transcription start site region 64666	130 bp downstream
Tssr64667	transcription start site region 64667	97 bp downstream