rs51098747 SNP Detail

Summary

• ID
  rs51098747
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:144599407 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCTGGGTA TATGCCCAGG
  AGAGGTATTG CTGGATCTTC CAGTAGTACT ATGTCCAATT TTCTGAGGAA CTGACAGACT
  AATATCCAGA GTGGTTGTAC CAGCTTGCAA TCCCACCAGC AATGTAGGAG TGTTCCTCTT
  TCTCCACATC CTCACCAGCA TCTGCTGTCA AAAAGTGTGC ATTGCTACAC CTGGTGACAT
  S
  TGGGATTCTT GTGGCCAGAA CTCTGGGTGC TCACAGGTTT ATTATAGCTG AAGGGTTTAT
  TATTGCTGAA GACTCTTCCT GTGTACCAAA CATGTTAGTA AAACTGCCAG TGGAGGTGAG
  CATATGGAAA TGATAACAAA ACTGAATCAC TTTTCTAAAA TTACTACCAG TGATATCCCA
  CACCGCAATC TATGATGTTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147838896	ENSMUSSNP2866631	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51098747					SNP	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144599407 () rs orientation: forward

Symbol	Name	Function Class
Gm57096	predicted gene, 57096	within coordinates
Rr604241	regulatory region 604241	within coordinates
Rr604242	regulatory region 604242	296 bp proximal