rs51076707 SNP Detail

Summary

• ID
  rs51076707
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:162692157 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTACTGTCT CCTCCACATC AATGACAGAA AACACAAATA
  ATTAAACAAG ATCAGATTGA GCATGCTCCT CCATTATTGA GATACTATGT GGGCATGGGG
  R
  ATCTCATTTC CAAAGACAGA GGGGCCTTGA GTTATTTAAG AGTGCCAGAG AGCACAGTGA
  TATTCAGTGT TTTGAACCAT AGTTTATGGT AGCTCAGAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145945096	ENSMUSSNP3607261	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51076707					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:162692157 () rs orientation: forward

Symbol	Name	Function Class
Fmo1	flavin containing monooxygenase 1	Intron
Rr422026	regulatory region 422026	33 bp distal
Rr422027	regulatory region 422027	238 bp proximal
Rr422028	regulatory region 422028	1868 bp proximal
Tssr14673	transcription start site region 14673	1771 bp downstream
Tssr14674	transcription start site region 14674	1837 bp downstream
Tssr14675	transcription start site region 14675	1852 bp downstream
Tssr14676	transcription start site region 14676	1875 bp downstream
Tssr14677	transcription start site region 14677	1895 bp downstream
Tssr14678	transcription start site region 14678	1914 bp downstream