rs50716703 SNP Detail

Summary

• ID
  rs50716703
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:145652827 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCACCGAGT TTGACTTGTT
  GATGCCCAGT GGTAACTCTG TGTGTGTTTA TTAACTTTGT TATTTATTTT ATGTGTATGA
  CCGTTTTGCT TACATGTCCA TCTGCATATC ACTCATATCA CTAGCAGTAC CCACAGAGGC
  CAGTAGAGGG CATCGGATCC CCTAGACCTG AAGTTACAAA CAGTCTCGAG CTGTGAACCT
  A
  ACTCCCACCT ACTAGAGAAG CAGCTTGTGT TCGTAACCAC TGAGCTGCAT CTCCAGCCCC
  ACCCCACCCC TCAGCCATAA AACCTTTTTT CCAGTTTTGC ATTGTTCTTT TAACTATACA
  AGTAGGCTCT GTGGGCTGAA CTGATACATT GACAGGGAAC CTTGATGTTA ACCCTGAAAC
  TCCTCAAGCC GCTCTCTGAA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147846535	ENSMUSSNP6310332	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs50716703					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:145652827 () rs orientation: forward

Symbol	Name	Function Class
Rin2	Ras and Rab interactor 2	Intron
Rr566581	regulatory region 566581	within coordinates
Rr566582	regulatory region 566582	44 bp distal