rs50632064 SNP Detail

Summary

• ID
  rs50632064
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:155873337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCACCCTTCT CTACTAAATA AGAGAGAAAG AAAGATAGAG
  GAGAAAGGGA GCAAATGGTA TCATTAGACG ACTTTCTGCT GACTAGGGGG CGTCGAATTG
  Y
  TGGGGCAAGT TTGATCTTCA ATGTCCTGAT ATCTAATTTC TTCTTGTTTC TTCTTTGGGA
  ATGACTACTG TGATGGTTTG TATATGCTTG GCCCAGGGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148115584	ENSMUSSNP4165557	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss321442859	CHEV_4_155162989	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50632064					SNP	C	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:155873337 () rs orientation: forward

Symbol	Name	Function Class
Ankrd65	ankyrin repeat domain 65	1559 bp upstream
Gm55808	predicted gene, 55808	701 bp upstream
Rr377468	regulatory region 377468	1163 bp upstream
Rr606572	regulatory region 606572	184 bp distal
Rr606573	regulatory region 606573	34 bp proximal