rs50559506 SNP Detail

Summary

• ID
  rs50559506
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:95311669 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAA TGTAAACAAA TGAACACAGC
  Y
  GTGAGACAAT AAAACTTTAT TTACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss133407757	ENSMUSSNP6093929	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs50559506					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:95311669 () rs orientation: forward

Symbol	Name	Function Class
AY512915	cDNA sequence AY512915	695 bp upstream
Gm53325	predicted gene, 53325	5 bp downstream
Rr635006	regulatory region 635006	132 bp proximal
Tssr62186	transcription start site region 62186	694 bp upstream