rs50548909 SNP Detail

Summary

• ID
  rs50548909
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:167120494 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTTCAGGCT ATCACATACG GAGAACGAAG TGGTGACATC
  TCGGGAGACA CAGGCAGGCA AAGAAAGGTC CATGAGTTCA GGGCCAGGCT GATCTGAGTT
  S
  CAGGCCAGCC AGGGCTTCAA AGCAATATTT TGTCTCAAAT AGCAAATACT AAATTAAATA
  TTTGAGTACT TTGGTGTTTG TTTGTTTGTT TTCATATGT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146036444	ENSMUSSNP2816335	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50548909					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:167120494 () rs orientation: forward

Symbol	Name	Function Class
Gm57182	predicted gene, 57182	within coordinates
Rr422673	regulatory region 422673	within coordinates