rs50217506 SNP Detail

Summary

• ID
  rs50217506
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:144598648 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGTA TTTGCCAGGC ACTGGCATAG
  S
  CTCACAAGAG ACAGCTATAT CAGAG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147838855	ENSMUSSNP1757078	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
ss321410527	CHEV_4_144461981	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs50217506					SNP	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144598648 () rs orientation: forward

Symbol	Name	Function Class
Gm57096	predicted gene, 57096	within coordinates
Rr604241	regulatory region 604241	739 bp proximal
Rr604242	regulatory region 604242	1055 bp proximal