rs50197441 SNP Detail

Summary

• ID
  rs50197441
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:137718919 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCCTCCTC TTCCTCCTCC
  TCCTCCTCCT CCTTCTTCTT CTTCCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT
  TAGTCTGATT CTCTCATGCT TTTCTTTTTG AAAGCTGGGA CCTTAGGCTG GGTAGGGCCT
  TGCCTGAGAG GACCACTCCC TCCATTACAA TCCAGATCCG TAATCTCCTT ATCTCTTTCA
  R
  AACAAGCCCT GGCTCCAGCT TTAAGTTTCC TGATCTGATT TTTCTCTCCA GACTGTCTAT
  TTCATATTTT TTTGGCCCCA CTTTTCTCAT TATAGACCAT CATAAGAGTA ATAGTTAATC
  ATATCACGAT GGAGTTGGTA TTAGTCTGTC TTGAAATTTC TGCCAAAGAA GTAATTAGCC
  CATGACTTTA AAATTGGCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320977692	CHEV_3_137676122	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs50197441					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137718919 () rs orientation: forward

Symbol	Name	Function Class
Gm19708	predicted gene, 19708	within coordinates
Rr586058	regulatory region 586058	1526 bp proximal