rs50163766 SNP Detail

Summary

• ID
  rs50163766
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127653394 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCCAAGAC AGAAATCAAC
  GGGAAACTAC ACAAATCCAA CCCTGGGAGG ATGACAAACA GCAGAGACCC TTCAGGAATG
  AAGGTATGGG TCCCTCCTCC AGGGGAAGAA CCAAGATCTG CCAAGGTGCT TGCTGAGGGT
  GGAGGAAACA CAGAAACAGT AGAGGAGGAA GATAGTTATA ACTACCAGCT TTGTCATGTA
  R
  CCAATTGCAA AAAACAAGGA TTATAATTGA CGTGAGTCCT TTAGTTATAT TTTGTTAAGA
  TATGTTTGGG CAGATATTTG CTTTATTTTC TTGATTTATC ATGCAGTATC ACATCAATGA
  GAGAATACCA ATGATTGTTA TATGTATGGT TGAGATTCTG AAAGATTTTT TCCTTAAGGA
  ACAGTACCAT TTATTCTAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135873332	ENSMUSSNP3965471	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss320957577	CHEV_3_127562663	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50163766					SNP	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127653394 () rs orientation: forward

Symbol	Name	Function Class
Gm35585	predicted gene, 35585	within coordinates
Rr584887	regulatory region 584887	1653 bp proximal
Tssr31614	transcription start site region 31614	1840 bp upstream