rs50146520 SNP Detail

Summary

• ID
  rs50146520
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147613748 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttgtactga atgtctatat tgctttttgg
  taaaataaac atattcatta tgttaatcct attgatacat gaacaaggga gatctttcca
  cgttctgata tcttcctgtt tctttcttaa gatactttaa cttcttctcc tacaggtttt
  S
  acttgcttgt ttagaggtaa ctgaaggtat tttcctttgt ttgtggctaa agtggagggt
  tctgtttcca taacttcttt ttcaaccctt ttcatcaatt gtgtatagga aggctaatga
  tttcttcaag tcaattgtgt atgcagacac                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss147967837	ENSMUSSNP3846108	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss321414794	CHEV_4_146903400	CHEVERUD	SCREENING_POP	f	SNP		G	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs50146520					SNP	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147613748 () rs orientation: forward

Symbol	Name	Function Class
Gm13141	predicted gene 13141	1117 bp upstream
Gm69897	predicted gene, 69897	within coordinates
Rr398834	regulatory region 398834	385 bp downstream
Rr604496	regulatory region 604496	1248 bp proximal