rs50068065 SNP Detail

Summary

• ID
  rs50068065
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:137719511 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAAAAAGC AACACATGGT
  TGTAGTTTGC TTCCTGGTAC CAAGTTCTGT GTTGGCTACT TTTCTGTTGC TGTGACAAAC
  ATCATGACCA AGGCAACTTA CACAATGCAG GGTTTCTTTA CAGTTGCAGA GGATGAGAGT
  CCATGATGGA AGAGCAGAAA TGACAGCAGG GTGACACATG GCTAGAGGAG CAACTGAGAG
  S
  TCATGTTTTG ATCCACACTC AGGAAGGAGC AGTGATAGGT GAGTCTGGAT CAAGACTTGG
  TGATCTTTCC TGGGTTAAGG ACCAAAGAGT ACATATTTCA CATCTGTGGC TTGCACAGTC
  CCTGTCACAA GTCTACCTTG CCATGACAGA GTGAAAACAG AGATAAGTAA AAAACACATG
  TCTGTGTTCC CATAGCCTTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135946678	ENSMUSSNP1056388	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	C
ss320977699	CHEV_3_137676714	CHEVERUD	SCREENING_POP	f	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50068065					SNP	C	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137719511 () rs orientation: forward

Symbol	Name	Function Class
Gm19708	predicted gene, 19708	within coordinates
Rr586058	regulatory region 586058	934 bp proximal