rs49956687 SNP Detail

Summary

• ID
  rs49956687
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:79133976 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTG AAAACACTCA TAAAAACAGA
  A
  CACGAGCCGG CGTGGTGGCA CACGC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss135369171	ENSMUSSNP6254423	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs49956687					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:79133976 () rs orientation: forward

Symbol	Name	Function Class
4921511C10Rik	RIKEN cDNA 4921511C10 gene	within coordinates
Gm66403	predicted gene, 66403	within coordinates
Rapgef2	Rap guanine nucleotide exchange factor (GEF) 2	Intron
Rr578489	regulatory region 578489	607 bp proximal