rs49895178 SNP Detail

Summary

• ID
  rs49895178
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:125902449 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAACTGTAA TAAGGGCATG
  CTTAAAGTAT AGACTCTCCA ATAGCGTTCC AAAAATAGAG GGGGATATTT TACAGGATTT
  GTGGCTGGGT TGATTATCCT TGATAAAATA ACATAGAAAA ATACTTTAAG CATTTTAATA
  ATTTCTTGTC AAATCTCTTT CACTTTTAAA CAGATATTTT AAAATAGTAA CATGTAAATG
  M
  GTGCTTTTGG TGTTTTCAAA ACCTTTTCCT ATGATTCTTC TTGTTCAAAG TAGAAGAAAA
  TAAAGTACCC TCTACTTGCT GTATAATTAA CTAACGAGAG AAAATGTCCA TTTTGTTTCA
  TGTGTGCTAC CTTACAGTTG GGCATTGTTG AACCACAGCT TTCTATTCCC ATCCCCCACT
  CCTGGCCCAG TACTTAGAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147494560	ENSMUSSNP161054	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs49895178					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125902449 () rs orientation: forward

Symbol	Name	Function Class
Fam227b	family with sequence similarity 227, member B	Intron
Fgf7	fibroblast growth factor 7	Intron
Rr564314	regulatory region 564314	105 bp proximal