rs49828822 SNP Detail

Summary

• ID
  rs49828822
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:125901872 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTTTGTCCC AGGTCATTGT ACAAGTGAGA ACATGGGCTG
  TAATGTTCAG GAGCCTTCAG TCCTTTCCAT CTGGACAGGC TATGAGAAGT CTAGATTGAA
  R
  AAAGAACTGT TCAGATGAGG GCTCCAAGAC GGGGCTTCTG GAGGACAACT GTACTCTGAG
  GTATCGTGCT CAGGCCTTCA GTCCCACCAG GTCAAGTAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147494469	ENSMUSSNP4342682	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49828822					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125901872 () rs orientation: forward

Symbol	Name	Function Class
Fam227b	family with sequence similarity 227, member B	Intron
Fgf7	fibroblast growth factor 7	Intron
Rr564314	regulatory region 564314	682 bp proximal