rs49517353 SNP Detail

Summary

• ID
  rs49517353
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:128160905 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCAAAACTT TCTATGAAGC CAAAAATAAA CTCCTCCTGC
  CTTCATCTCC CCAGTTGCCT GTTGATGCCC ACTGGAAGCC TTGAGTCTCC CCCAAGGACC
  S
  AAGTCATGTG GGCACACGAA TTTTCTTATT TTCTTCCTCG TGGTCTTGTC GGGGAGAGGC
  AGGAGATGTG TGTGCTGTTT CAGAAGGCTG AATCAGGCC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147557078	ENSMUSSNP6443759	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49517353					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:128160905 () rs orientation: forward

Symbol	Name	Function Class
Morrbid	myeloid RNA regulator of BCL2L11 induced cell death	within coordinates
Rr564705	regulatory region 564705	331 bp distal
Rr564706	regulatory region 564706	within coordinates
Tssr643	transcription start site region 643	226 bp upstream
Tssr26157	transcription start site region 26157	96 bp upstream