rs49311447 SNP Detail

Summary

• ID
  rs49311447
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:167118110 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTTCTTTCT ACCTTTGTAA ATGTTGACAA GTTACTTGGA
  GTCTGTAAAT GTCAGCACTG TTAGGTGATA ACCAACTGGC AGAACGGTTG TGAAAATCAC
  Y
  GCAAATTACT AACGTGTTCA TTGTTAAGAA TAAACCCCCT CCCCTCCTCT TTCTCAGAGC
  TAGATTACAC AGAGTATAGC ATTCGGGGAT TAAGTGTTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146036323	ENSMUSSNP2372587	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49311447					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:167118110 () rs orientation: forward

Symbol	Name	Function Class
Gm57182	predicted gene, 57182	within coordinates
Mir6347	microRNA 6347	316 bp downstream
Rr422672	regulatory region 422672	79 bp distal
Rr422673	regulatory region 422673	1685 bp proximal