rs48841634 SNP Detail

Summary

• ID
  rs48841634
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:95311556 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGCT CCAGCTCAGA GGGCTGTAAA
  M
  TTTTCTAGGC GGGCCAAATA ACAAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss133407754	ENSMUSSNP2890869	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48841634					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:95311556 () rs orientation: forward

Symbol	Name	Function Class
AY512915	cDNA sequence AY512915	582 bp upstream
Gm53325	predicted gene, 53325	118 bp downstream
Rr635006	regulatory region 635006	245 bp proximal
Tssr62186	transcription start site region 62186	581 bp upstream