rs48367484 SNP Detail

Summary

• ID
  rs48367484
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147613904 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGGTTCTGT TTCCATAACT TCTTTTTCAA CCCTTTTCAT
  CAATTGTGTA TAGGAAGGCT AATGATTTCT TCAAGTCAAT TGTGTATGCA GACACTTTGC
  T
  AAAATGTTTA TGAACTGTAA TTTTCTGGTA GAATTTTTGG CTCACTTATA TACATTATTA
  TATCATCTGA ATTTCATCTT TTCCAAATTG TATCCCCTT                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss147967856	ENSMUSSNP2849325	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss321414795	CHEV_4_146903556	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs48367484					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147613904 () rs orientation: forward

Symbol	Name	Function Class
Gm13141	predicted gene 13141	1273 bp upstream
Gm69897	predicted gene, 69897	within coordinates
Rr398834	regulatory region 398834	541 bp downstream
Rr604496	regulatory region 604496	1092 bp proximal