rs48328826 SNP Detail

Summary

• ID
  rs48328826
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:35982638 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTACAGGCA TGTACCATCA
  TGGTCAGCTT ATAGGGTCAT GGGAATGAAA CCCAAGGCTT TATAAAGCAC TCTACCAACA
  CTCAGGCCCA TAAGTGGTAA ATAAAAATTA AAATGCAGCA ACCTAAAAAG GAGGTAAGTA
  GTATATACTT CAACTGATCA CTGTGCTCAA TGGTGAGGGA TTCAAAAGTG TAACTCAATA
  Y
  TTTTTTTTTT TTTTTTTTTT AGAAAATTAC TGTTCAAAAG TAAATCTCTT AAATTTTTAC
  AATGCAGACC CACAATTTTA AAACATTTTA CAAATATATT GAAAATGGCT TTGGGGTGCT
  TTCTCTTGGC TGAGGAGTAT GAACCTTAAG TAGTGTGTCA AAGCAATCAC TTAGCCACCC
  AGGGACTTGT TTCTGTCCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134776075	ENSMUSSNP4522732	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48328826					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:35982638 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dcun1d1	defective in cullin neddylation 1 domain containing 1			Intron
				Noncoding-Transcript-Variant
Rr575280	regulatory region 575280			1393 bp distal
Rr575281	regulatory region 575281			1022 bp proximal
Rr575282	regulatory region 575282			1418 bp proximal
Rr575283	regulatory region 575283			1575 bp proximal