rs47859630 SNP Detail

Summary

• ID
  rs47859630
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:101041959 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TCAAATACAT GTTTTACACA CAAGCTCTAA ATTTGGGCAG
  CCTACCCTAT TGAGACCTGG AAGACAGAGT TTGATAAGCC CGGAGAGTTC TACGGTGGGT
  Y
  AGTCTGAGCA TCATTTTGTT TACTTTGCAT AATTTTGTAT CACTTTTCTA TTCCATCTTG
  TTTGAGTGTG TATGTGCATG TGCATGTGTG GAGGTTAGGG A                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss133429409	ENSMUSSNP1347513	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs47859630					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:101041959 () rs orientation: forward

Symbol	Name	Function Class
Gm43948	predicted gene, 43948	within coordinates
Gm43950	predicted gene, 43950	within coordinates
Rr635751	regulatory region 635751	923 bp distal