rs47850098 SNP Detail

Summary

• ID
  rs47850098
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:125902128 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGTGTATCCG TAACATGTTT GTTACTGTCT CACTTTGTGT
  GTAAAGCAAG GTCGACCTGC ACTTGTCTAT TGGTTGTATA TTATTCTATA CTCTACAGTG
  W
  GTGGGGAAAA CGTATCTAAA GCAAAGCTTT GGCAGGCACT CCAGGTCAGT GATAGTTTAC
  TGAACATGCA TGAGACCCTT GACTTAACCC CAAGTACCA                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147494508	ENSMUSSNP1439810	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47850098					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125902128 () rs orientation: forward

Symbol	Name	Function Class
Fam227b	family with sequence similarity 227, member B	Intron
Fgf7	fibroblast growth factor 7	Intron
Rr564314	regulatory region 564314	426 bp proximal