rs47670677 SNP Detail

Summary

• ID
  rs47670677
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:144599166 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTTTTGTG ATTGGGTTAC
  CTCACTCAGG ACGATATCCT CCAGATACAT CCATTTGCCT AAGAATTTCA TAAATTCATT
  GTTTTTAATT GCTGAGTAGT ACTCCATTGT GTAAATGTAC CACATTTTCT GTATCCATTT
  CTCTGTTGAT GGACATCTGG GTTCTTTCCA GCTTCTGGCT ATTATAAATA AGGCTGCTAT
  R
  AACATAGTGG AGCATGTGTC CTTATTACCA TTTGGAACAT CTTCTGGGTA TATGCCCAGG
  AGAGGTATTG CTGGATCTTC CAGTAGTACT ATGTCCAATT TTCTGAGGAA CTGACAGACT
  AATATCCAGA GTGGTTGTAC CAGCTTGCAA TCCCACCAGC AATGTAGGAG TGTTCCTCTT
  TCTCCACATC CTCACCAGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147838870	ENSMUSSNP2063639	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47670677					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144599166 () rs orientation: forward

Symbol	Name	Function Class
Gm57096	predicted gene, 57096	within coordinates
Rr604241	regulatory region 604241	221 bp proximal
Rr604242	regulatory region 604242	537 bp proximal