rs47587350 SNP Detail

Summary

• ID
  rs47587350
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161618041 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTGC TTTGATCTCT GCTTTGTATA
  W
  TGCTACCTAC CTTTCCAGTT TTTGC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145922291	ENSMUSSNP6820068	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47587350					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161618041 () rs orientation: forward

Symbol	Name	Function Class
Fasl	Fas ligand	1977 bp upstream
Rr421846	regulatory region 421846	1801 bp distal
Rr421847	regulatory region 421847	1080 bp proximal
Tssr14589	transcription start site region 14589	1989 bp upstream
Tssr14590	transcription start site region 14590	1976 bp upstream
Tssr14591	transcription start site region 14591	1966 bp upstream