rs47429770 SNP Detail

Summary

• ID
  rs47429770
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:137719336 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAGACCAG AAAACAGCCA
  CATTCCTGAT CAAAATCATC ACAAGAGTGG TCTCCAGACT AGTCGCTGAC AGTGTTCCCT
  CCAGAAACCC ATCTTCCAAG TTCCCACTAG GATGACCTCT GTTTACAGCA TTCAGATGCT
  TTTCTAGTCT AAAGTCTGAA TGCCCCACAT AATCCTCCAA AAAGCAACAC ATGGTTGTAG
  Y
  TTGCTTCCTG GTACCAAGTT CTGTGTTGGC TACTTTTCTG TTGCTGTGAC AAACATCATG
  ACCAAGGCAA CTTACACAAT GCAGGGTTTC TTTACAGTTG CAGAGGATGA GAGTCCATGA
  TGGAAGAGCA GAAATGACAG CAGGGTGACA CATGGCTAGA GGAGCAACTG AGAGCTCATG
  TTTTGATCCA CACTCAGGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135946675	ENSMUSSNP4695253	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
ss320977698	CHEV_3_137676539	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47429770					SNP	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137719336 () rs orientation: forward

Symbol	Name	Function Class
Gm19708	predicted gene, 19708	within coordinates
Rr586058	regulatory region 586058	1109 bp proximal