rs47308177 SNP Detail

Summary

• ID
  rs47308177
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:145652826 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCACCGAG TTTGACTTGT
  TGATGCCCAG TGGTAACTCT GTGTGTGTTT ATTAACTTTG TTATTTATTT TATGTGTATG
  ACCGTTTTGC TTACATGTCC ATCTGCATAT CACTCATATC ACTAGCAGTA CCCACAGAGG
  CCAGTAGAGG GCATCGGATC CCCTAGACCT GAAGTTACAA ACAGTCTCGA GCTGTGAACC
  G
  TACTCCCACC TACTAGAGAA GCAGCTTGTG TTCGTAACCA CTGAGCTGCA TCTCCAGCCC
  CACCCCACCC CTCAGCCATA AAACCTTTTT TCCAGTTTTG CATTGTTCTT TTAACTATAC
  AAGTAGGCTC TGTGGGCTGA ACTGATACAT TGACAGGGAA CCTTGATGTT AACCCTGAAA
  CTCCTCAAGC CGCTCTCTGA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147846531	ENSMUSSNP3245964	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47308177					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:145652826 () rs orientation: forward

Symbol	Name	Function Class
Rin2	Ras and Rab interactor 2	Intron
Rr566581	regulatory region 566581	within coordinates
Rr566582	regulatory region 566582	43 bp distal