rs47223748 SNP Detail

Summary

• ID
  rs47223748
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:138010358 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTAT CAGAGGTGTG GATGTCTCCC
  T
  CTAGTGGACA GTGTAGGCCA TCAGA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss147639126	ENSMUSSNP815823	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss321371996	CHEV_4_137838962	CHEVERUD	SCREENING_POP	f	SNP		T	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs47223748					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138010358 () rs orientation: forward

Symbol	Name	Function Class
Kif17	kinesin family member 17	Intron
Rr398625	regulatory region 398625	within coordinates
Rr602860	regulatory region 602860	within coordinates
Rr602861	regulatory region 602861	within coordinates
Rr602862	regulatory region 602862	33 bp proximal