rs46716268 SNP Detail

Summary

• ID
  rs46716268
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16716118 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTTGTGAA TCTGGCTATG
  TAAACTAGGC GGCTTTGAAC TCACAAAGAT CAGCCTTCTT CCCTCCTGAA TGCTAGGAAT
  AAAGGTGTTT GGCTCCGCCC TTGGCTACAG GTACTTATGT GCTACCAAGT GGGTGCTCAC
  AACCAAACCC AGGTCCTCTG CAAGAGCAGT CAGTGCTCTA AACCACTGAG CCATCTCTCC
  A
  GGTCCACCTC CTGACTTCTC CCAGGATCTG ACTTCAGTTG GAAGGTTTCA TGAGGGTCGA
  CTCATAACTG TAATTTCAGT TCCAGAGGAT CCAATGTCCT CATCTGACCT GCATGGCATC
  AGGCATGCAT GTGCTACACA GACATACAAG CAGACAAAAC ACTCAGACAT AATATATAAA
  AAGCATTTAA AAAGGAACGA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss148401819	ENSMUSSNP5020097	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs46716268					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16716118 () rs orientation: forward

Symbol	Name	Function Class
Pnma8c	PNMA family member 8C	890 bp upstream
Rr642834	regulatory region 642834	1387 bp distal
Rr642835	regulatory region 642835	403 bp proximal
Tssr64666	transcription start site region 64666	872 bp upstream
Tssr64667	transcription start site region 64667	980 bp upstream