rs46702251 SNP Detail

Summary

• ID
  rs46702251
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138124712 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAAA ACAAACCAAA ACCAAACCAA
  M
  CAAACAAACA AAAACCAGCC CTATG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147644488	ENSMUSSNP4644678	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	A
ss321373127	CHEV_4_137953316	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46702251					SNP	C	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138124712 () rs orientation: forward

Symbol	Name	Function Class
AB041806	hypothetical protein, MNCb-2457	within coordinates
Cpgi15151	CpG island 15151	768 bp distal
Fam43b	family with sequence similarity 43, member B	943 bp upstream
Rr602907	regulatory region 602907	1994 bp distal
Rr602908	regulatory region 602908	1967 bp distal
Rr602909	regulatory region 602909	383 bp distal
Tssr44164	transcription start site region 44164	964 bp upstream
Tssr44165	transcription start site region 44165	937 bp upstream