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rs46332190 SNP Detail
Summary
  • ID
    rs46332190
  • Variation Type
    SNP
  • Alleles
    A
Genome Location and Flanking Sequence
  • Location
    Chr3:52664219 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                TGTGGTAAGG AGGGTGTGGT
    AGAATAAACT ATTTACCCCA TGGCTGGACT GAAAAAGCAC AAGAAGGGCA ATCGCGAGTG
    GTCAGAAGTG GTTCCCACCT TTTAAAGATT CCACTACCTC CCAAGAGCAC CATGGGTCAC
    TTTGCTAAGC CGTAGACATC CTCCGTGCCC AGGTCTGCAC CTCTATAGGA AGAGGCGGAA
    A
    TGTACCCTGC ACGTGGTTCC CACCTCTTCC CTCCTCTTCA GACCACACCT TCTTCCCTGC
    TGGGAAGCTT CTGATGATGC CCTTTTACAG TTTGGTCAGA GCCAGTTATG ATGGGCACTC
    AGTCCCAGCA CTCAGGAGAC AGGGGCAAGC CGAGGGTCTC TGACTCTGAG GCCAGCCAAC
    CTGGTTTAAG TTCCAGGACA                                            
    
    A = A
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
A/J
DBA/2J
ss135178212 ENSMUSSNP592008 ENSEMBL ENSEMBL_Sanger f SNP A A
SNP Consensus Information
SNP Consensus Type
A/J
DBA/2J
rs46332190 SNP A A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:52664219 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm2447 predicted gene 2447 within coordinates
Rr576580 regulatory region 576580 1396 bp distal
Rr576581 regulatory region 576581 1820 bp proximal
Rr576582 regulatory region 576582 1951 bp proximal
Tssr33262 transcription start site region 33262 1742 bp upstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory