TGTGGTAAGG AGGGTGTGGT AGAATAAACT ATTTACCCCA TGGCTGGACT GAAAAAGCAC AAGAAGGGCA ATCGCGAGTG GTCAGAAGTG GTTCCCACCT TTTAAAGATT CCACTACCTC CCAAGAGCAC CATGGGTCAC TTTGCTAAGC CGTAGACATC CTCCGTGCCC AGGTCTGCAC CTCTATAGGA AGAGGCGGAA A TGTACCCTGC ACGTGGTTCC CACCTCTTCC CTCCTCTTCA GACCACACCT TCTTCCCTGC TGGGAAGCTT CTGATGATGC CCTTTTACAG TTTGGTCAGA GCCAGTTATG ATGGGCACTC AGTCCCAGCA CTCAGGAGAC AGGGGCAAGC CGAGGGTCTC TGACTCTGAG GCCAGCCAAC CTGGTTTAAG TTCCAGGACA A = A Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
DBA/2J |
---|---|---|---|---|---|---|---|
ss135178212 | ENSMUSSNP592008 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | A |
SNP Consensus Information | |||||||
SNP | Consensus Type | A/J |
DBA/2J |
||||
rs46332190 | SNP | A | A |
Location: Chr3:52664219 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm2447 | predicted gene 2447 | within coordinates | ||||||
Rr576580 | regulatory region 576580 | 1396 bp distal | ||||||
Rr576581 | regulatory region 576581 | 1820 bp proximal | ||||||
Rr576582 | regulatory region 576582 | 1951 bp proximal | ||||||
Tssr33262 | transcription start site region 33262 | 1742 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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