rs46160698 SNP Detail

Summary

• ID
  rs46160698
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:137719614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGCAGGGT TTCTTTACAG
  TTGCAGAGGA TGAGAGTCCA TGATGGAAGA GCAGAAATGA CAGCAGGGTG ACACATGGCT
  AGAGGAGCAA CTGAGAGCTC ATGTTTTGAT CCACACTCAG GAAGGAGCAG TGATAGGTGA
  GTCTGGATCA AGACTTGGTG ATCTTTCCTG GGTTAAGGAC CAAAGAGTAC ATATTTCACA
  Y
  CTGTGGCTTG CACAGTCCCT GTCACAAGTC TACCTTGCCA TGACAGAGTG AAAACAGAGA
  TAAGTAAAAA ACACATGTCT GTGTTCCCAT AGCCTTTACT TATAAAGAGG TGGTGAAAGA
  TCCTGACAGA ATGTAAAAGG TCACTGAAGC CCTGAAATTG GCAAAATAGA TTTCATTGTT
  AGTAGAACTA GCTTCACTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss135946690	ENSMUSSNP7076055	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss320977703	CHEV_3_137676817	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs46160698					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137719614 () rs orientation: forward

Symbol	Name	Function Class
Gm19708	predicted gene, 19708	within coordinates
Rr586058	regulatory region 586058	831 bp proximal