ACCCC CGCCCCATCC CTTGTCAGAG Y TCCCGTGCAT GCGCAGTCGC GCCGG Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|
ss135513191 | ENSMUSSNP5361906 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | ||
ss320841250 | CHEV_3_95755202 | CHEVERUD | SCREENING_POP | f | SNP | C | T | |
SNP Consensus Information | ||||||||
SNP | Consensus Type | A/J |
LG/J |
SM/J |
||||
rs45882886 | SNP | T | C | T |
Location: Chr3:95858591 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi13530 | CpG island 13530 | within coordinates | ||||||
Gm56819 | predicted gene, 56819 | within coordinates | ||||||
Gm65572 | predicted gene, 65572 | 49 bp upstream | ||||||
Rr375411 | regulatory region 375411 | within coordinates | ||||||
Rr581095 | regulatory region 581095 | within coordinates | ||||||
Rr581096 | regulatory region 581096 | 2 bp proximal | ||||||
Rr581097 | regulatory region 581097 | 60 bp proximal | ||||||
Rr581098 | regulatory region 581098 | 1819 bp proximal | ||||||
Tssr30663 | transcription start site region 30663 | 193 bp downstream | ||||||
Tssr30664 | transcription start site region 30664 | 28 bp upstream | ||||||
Tssr34570 | transcription start site region 34570 | 243 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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