rs45794717 SNP Detail

Summary

• ID
  rs45794717
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:145652163 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTACTTCTTC CTCTTTCCTC
  CCTTCCTCTC TCTTCCTTAT TTCCTTGCTT CCTTTTGTCC TTTTCTCTCT GAGACATTAT
  ATCCCAGGCT GGCCTCTAAG TTGTAATTCT CCTGCCTCAG CCTCCAGAGT GCTGGAATTA
  CAGGCATGAA TCAACTGTAC TGTCTTTTTT TTTTTTTAAA GATTTATTTA TTTATTATAT
  S
  TAAGTACACT GTAGCTGTCT TCAGACACTC CAGAAGAGGG CGTCAGATGA TGGTTGTGAG
  CCACCATGTG GTTGCTGGGA TTTGAACTCC GGACCTTCGG AAGAGCAGTC GGGTGCTCTT
  ACCCATTGAG CCATCTCACC AGCTCCAACT GTACTGTTCT TAAGAACAGC ATTTTGAACT
  GGTTTTAACA TCCTCTGCAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147846497	ENSMUSSNP3926630	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45794717					SNP	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:145652163 () rs orientation: forward

Symbol	Name	Function Class
Rin2	Ras and Rab interactor 2	Intron
Rr566581	regulatory region 566581	520 bp proximal
Rr566582	regulatory region 566582	599 bp proximal