rs45705729 SNP Detail

Summary

• ID
  rs45705729
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:118933738 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGTGCCCAC AAGGCGCGGA ACATCTGTCG CCAGCCACCA
  GAAGCTGGAA GAGACAAAGA CCAGTTTCTC CCACAGAGGT GTGGAAGGGC GGGCGGGGAA
  K
  CCTGCTGCCA CTTGCTTTGA GACTTCCTCC TCTGTGTGGA AAGCACATTC CTGCCATTGC
  CCGGCACCCA GCGAGGCAAC TGGTTCCAGC AGCCATGGG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss147323298	ENSMUSSNP2195016	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
ss321285058	CHEV_4_118749146	CHEVERUD	SCREENING_POP	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs45705729					SNP	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:118933738 () rs orientation: forward

Symbol	Name	Function Class
Gm35510	predicted gene, 35510	within coordinates
Rr598481	regulatory region 598481	1444 bp distal
Rr598482	regulatory region 598482	within coordinates