rs37997098 SNP Detail

Summary

• ID
  rs37997098
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:68670754 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATAAGTTTC ACATAGTGGG
  TATCTACTCT CCAAGATGGG AGTCCGTAAA ATAAAATCTT TAAAAACCTG GCTGTGACTG
  AGTTCTTTGT CATCATCGTC ATCGTTTGAA AATGATTTGA AAAATGATTA TAGATTAGAT
  GAACCAAGTT GAGGAGGACA GGAAATTATT ATGATTACAG AAACATTTTC TGCATTTGAC
  R
  TGAACATTTT GTGCGTTTGC TAGCCAGTGC GGTAAATAGT CCCGCCATGC TCATGAGACC
  AAAAGTAACT TCAAAAGAGC ACCCTGTTTT TCATCCAGGC TGTCTTTCAT AGAACAAAAG
  CCTGGTGGAT CTCTAAGGAG TCCGTGGTAG GGAGTGGGAA AACTGACGCA CTGTTAGGAG
  AACACAGACT GGGAAACACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss51541517	NES14691040	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs37997098					SNP	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51541517	NES14691040	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:68670754 () rs orientation: forward

Symbol	Name	Function Class
4930535E02Rik	RIKEN cDNA 4930535E02 gene	1417 bp upstream
Gm35584	predicted gene, 35584	748 bp downstream
Rr578078	regulatory region 578078	1773 bp distal
Rr578079	regulatory region 578079	947 bp distal
Rr578080	regulatory region 578080	310 bp proximal
Rr578081	regulatory region 578081	1288 bp proximal
Tssr29495	transcription start site region 29495	1966 bp downstream
Tssr29496	transcription start site region 29496	1941 bp downstream
Tssr29497	transcription start site region 29497	1340 bp downstream
Tssr33510	transcription start site region 33510	1998 bp upstream