rs37865281 SNP Detail

Summary

• ID
  rs37865281
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:70093921 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTCCAGCA CTATAAAAAG
  ATGAATCGCT CATATTCAAG GAAAAGAGTT TGTGGTAATG TGTTACAGGA AGAACAGAAA
  GATAATACTG AGTTTCTTTT TTGTATTTTC ATACAAAATT TTTTCATACC AAAAAAGAAA
  AAGAAAGAAA AAACACAAGA GATGGTGAAC TAATTACCTT TGCTGGACTC TGAAATTTTT
  W
  CATGTGTTTC ATGCATGCTG GCTTTCATGA AGAAAGAGGA AGTGTTCAGA CCAAGGACTG
  TGTGTTATGC AGGCAGCTGG TGAAATTCTC AAGGAGGTTT GTGTAGGAGG CTGAAGCACT
  GTGGGAGGAT AGCTATAATA TTGCTGACAG TAATAAACTG CCAGGTCTTC AGCCTTCACA
  CTGCTGATGG TGAGAGTGAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
ss51681369	NES14824723	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	T	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
rs37865281					SNP	A	A	A	A	A	T	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51681369	NES14824723	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70093921 () rs orientation: forward

Symbol	Name	Function Class
Igk	immunoglobulin kappa chain complex	within coordinates
Igkv8-30	immunoglobulin kappa chain variable 8-30	124 bp downstream
Rr379563	regulatory region 379563	1458 bp upstream
Tssr61309	transcription start site region 61309	694 bp downstream