rs37603229 SNP Detail

Summary

• ID
  rs37603229
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:70094386 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAATCAGCA GTTTAGGAGA
  CTGCCCTGGT TTCTGCTGGT ACCAGGCCAA GTAGTTCTTT TGATTGCTAC TATATAAAAG
  GCTCTGACTG GACTTGCAGC TCATAGTAAC CTTCTCTCCA ACTGACACAG CTAGGGAGGA
  TGGAGACTGT GACATCACAA TGTCCCCACA GGTACCTGAA ATAAGTAGAA AGTGAACATG
  M
  ATACATACAC AAATAGATTA TTATAACAGT TGAAATTTGT CAAAGGTCTT TGTAATGTCA
  TATTGTCAGA GTTATTATGG AAGTAATATT ACACACTTGC ACATAGTATA AATTTCTTAT
  ATAAAAAGGT GTAACTCTGA AATGATAATA CTTTTAAATT TCTCACCAGA TACCCATAGC
  AGCAGTAACA TAAGAACCTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
ss51681333	NES14824735	PERLEGEN	MM_PANEL2	f	SNP	A	A	C	A	A	A	A	A	C	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
rs37603229					SNP	A	A	C	A	A	A	A	A	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51681333	NES14824735	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70094386 () rs orientation: forward

Symbol	Name	Function Class
Igk	immunoglobulin kappa chain complex	within coordinates
Igkv8-30	immunoglobulin kappa chain variable 8-30	Intron
Rr379563	regulatory region 379563	993 bp upstream
Tssr61309	transcription start site region 61309	229 bp downstream