rs37494140 SNP Detail

Summary

• ID
  rs37494140
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:70093346 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGTGGTGT GTGTGTATGT
  ATTTATATAT AAATGTACAT AAAAGTATAA GACAGACTAG AGTAAAAGAG ATAATAGGAA
  AAAATCAGGG CAGTTGGATG ATGTAGTGAA AATATAAGAC ATACTTGAAA GACATTGCTT
  TTATGAAATT TGTACATGAT GTATGTATAT TAGTAAACAA ATTTAAGAGA CTGCAAGACT
  R
  CTCAGATGGC AAAGACAATT GCCAAAAAGC CTGACATCAG AACTTAATTT GATCCCAAGA
  ACAAATATGA CAAAAAGAGA AAACCAAGTG CAAGTTGATT TTCCACAAAT GTGCCAAGGC
  AATTGTGCAC CTATGCATAT ACACAAGTAC AAAAAGGTAA GAATTTATGA AAAAGTAAAA
  AAAAAAAAAG AAAAATAGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51681393	NES14824698	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37494140					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51681393	NES14824698	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70093346 () rs orientation: forward

Symbol	Name	Function Class
Igk	immunoglobulin kappa chain complex	within coordinates
Igkv8-30	immunoglobulin kappa chain variable 8-30	699 bp downstream
Rr379562	regulatory region 379562	1769 bp downstream
Tssr61309	transcription start site region 61309	1269 bp downstream