rs37325598 SNP Detail

Summary

• ID
  rs37325598
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:81964101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACATCATT GCTTTTTAAG
  GGGAAGCAAC TGGTTGGAGC TGGATGGAGT AAGGATTGTT TTTTTTTCCC ACTGGAAATG
  CAAAGGAGGA CACAGCCTTT TGTTTTTGTC AATTACAGTA GCAAAGAGCC TTCACACACA
  CACACACACA CACACACACA CACACACACA CACACACACA CACTTCTGCT TCTTGAGTCA
  S
  CCCTTCCTGA GAGCCAAAAG AGGCGCTCTT CCTCAAGCCA CCGCACGGTG GCGCCTCCTC
  ACAGTCCCGG GGCCTTTCAC AAAGCGGCTT TTGTCCCTGC GGGCAAGCAA GCACAGCCAC
  TGTTCCCTGA GCAGAAACCT TGTCCAGGAG TGACCCCACT TGAGCTCACG AGGTTGTCGT
  TCAGTTGAGT CACAACCATC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51347841	NES13740460	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	G	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37325598					SNP	C	C	C	C	C	C	C	G	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51347841	NES13740460	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:81964101 () rs orientation: forward

Symbol	Name	Function Class
Gm20383	predicted gene, 20383	within coordinates
Gm44202	predicted gene, 44202	345 bp upstream
Rr632571	regulatory region 632571	within coordinates
Rr632572	regulatory region 632572	37 bp proximal
Rr632573	regulatory region 632573	456 bp proximal