rs37035493 SNP Detail

Summary

• ID
  rs37035493
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:83900110 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAATATGTAA AGTTTGGTAT
  ACTTGTCCCC CATCCCACAT CATCCCTAAG ACAACTGCTC CCCGTTTCTG GCTTTCAGTA
  CCTGAGAATA GGTCCTACAG GTTACAGGAA ATAGAGACTG CACGCTGCAA GGAGCCCGGC
  GCTAAGAAGC TCCTCAATCG GACCAGTACT TGCAGCACAC ACAAAGCATA AGCCAGGCGA
  S
  CGACCAGCAG CCGCAGGGCT GGGTGAGGGC TGACAGAGCA TGTGATAATC ATACTCACAG
  ACACACTTCA ATATAACATT CAATATAACA TATAAGGTCG CATTTTCAAT ATAACATGTT
  AAAGGCACAA AGTTAAAACT GTAGGCAGTC CTACAATCTA AAGGCGTCTA GTATTGAAAA
  GCCGTACACC AAGGAAGTGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss51569588	NES14675072	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	G	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs37035493					SNP	C	C	C	C	G	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51569588	NES14675072	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83900110 () rs orientation: forward

Symbol	Name	Function Class
Rr578944	regulatory region 578944	399 bp distal
Rr578945	regulatory region 578945	within coordinates
Rr578946	regulatory region 578946	658 bp proximal
Rr578947	regulatory region 578947	1237 bp proximal
Tmem131l	transmembrane 131 like	Intron