rs37010632 SNP Detail

Summary

• ID
  rs37010632
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:85312494 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCTACCCC CAAACTCTGG
  GAACTGGTGG CTATTTTCTC ATCTCTGAGT TGACCTATAG TTGGTAACTG CACAGTGGTG
  GACCCCATTG TGGTTCATCT GCTCTATGCT GGCAGAAGAC TGACGTCATC CACAGAGAAT
  ATTCTCCTGA GGTGTTCTGA GTGAACCCAT GACCCTGTCT TTAAGAGACA GCTGGAAAGA
  Y
  GTTACTGCTT CTCCACTGGG CCCAAAGAAT CTTTTGTCAG CATCTCACCT CCTTCACTCA
  TACCTTTTGT AATGCACAGC CACCAAGGAC CCCCGAGGAT GCCAGGGAGA CTGGCAGTAT
  TCACAAGCAA GCTAGAAGCT GGACCACAGA GCAGATACCT GACTTCACTT GAATGCACTT
  CAGCCAAGCC AGGCAAGACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51355961	NES13743416	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37010632					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51355961	NES13743416	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:85312494 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17641	CpG island 17641	1493 bp distal
Mir705	microRNA 705	780 bp downstream
Rab11fip5	RAB11 family interacting protein 5 (class I)	mRNA-UTR
Rr399730	regulatory region 399730	1795 bp downstream
Rr633176	regulatory region 633176	1600 bp distal
Rr633177	regulatory region 633177	310 bp distal