rs36957905 SNP Detail

Summary

• ID
  rs36957905
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:87417674 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCA CAGCGAAAGT ACTTTGCCAG
  R
  AGCACAAAGG GCTTCATCGG TGAGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss51577793	NES14674305	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs36957905					SNP	A	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51577793	NES14674305	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87417674 () rs orientation: forward

Symbol	Name	Function Class
Gm40085	predicted gene, 40085	within coordinates
Gm56788	predicted gene, 56788	within coordinates
Rr397760	regulatory region 397760	1830 bp downstream
Rr579501	regulatory region 579501	1852 bp distal
Rr579503	regulatory region 579503	1943 bp distal
Rr579504	regulatory region 579504	929 bp distal
Rr579505	regulatory region 579505	1213 bp distal
Rr579506	regulatory region 579506	1183 bp distal
Rr579507	regulatory region 579507	622 bp distal
Rr579508	regulatory region 579508	1641 bp proximal