rs3694433 SNP Detail

Summary

• ID
  rs3694433
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16715901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTTTTCC CAGACAGGAT
  TTCTTTGTGT CTTAGCTATC CAAGAACTCT CTTTGTAGAC CAGGCTGGCC TCTAACTCAC
  AGAGATCCAC CTGCGCGTGC CTCCTGAGTG CTGGGATTAA AGGCACGTGC CATCACTGCC
  CAGGACAAGT AGTTAGGTTT TGAATATTTG TTTATTTAGT GCCAATCTCA CTACACAGCC
  K
  TCACTGGATG GAACTTGCTT TGTGAATCTG GCTATGTAAA CTAGGCGGCT TTGAACTCAC
  AAAGATCAGC CTTCTTCCCT CCTGAATGCT AGGAATAAAG GTGTTTGGCT CCGCCCTTGG
  CTACAGGTAC TTATGTGCTA CCAAGTGGGT GCTCACAACC AAACCCAGGT CCTCTGCAAG
  AGCAGTCAGT GCTCTAAACC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J
ss5070580	WI_WGS_7_12121230	WI	MOUSE	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J
rs3694433					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16715901 () rs orientation: forward

Symbol	Name	Function Class
Pnma8c	PNMA family member 8C	1107 bp upstream
Rr642834	regulatory region 642834	1170 bp distal
Rr642835	regulatory region 642835	620 bp proximal
Tssr64666	transcription start site region 64666	1089 bp upstream
Tssr64667	transcription start site region 64667	1197 bp upstream