rs36718941 SNP Detail

Summary

• ID
  rs36718941
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:117546827 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCGGAGATC GTGAGGGGTA
  GAGCGTGCTC CCCAGAGTGT GCTCCCCAGT TTGCTACCCT GAAAGAGGCT ACAGACCCAG
  TGCTGAGTAT GACAAAGAAC TGTTGATTCA GCTATGCTGC GCGCACTGCG TGTGCACTGA
  CATCTGTGTG GAGAGACATA AGAAACGTTG GATTAGGAGC TGAGTGTTAA CAATAGATGT
  S
  TTAAGCTACT GGAACTCTGG AGATTTTTGG CAATGAGCTT ATTTCATTTT ATAATAAAAC
  AATAAAGCTA TTTTTGCAGC ATTTATCTTC ACAGGAGAAA GCCATGCTAT TGAGGGTGTG
  GGCATTGTTG TGGTAGAGCT TTGTCTGGAA TATAATTTGA CAGAAGCTAT TAAATTTTAA
  TGTGTGTATA TATACACTCA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss51407429	NES13720213	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C		C	C	C		G
ss321922584	CHEV_6_117519884	CHEVERUD	SCREENING_POP	f	SNP										C				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs36718941					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51407429	NES13720213	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:117546827 () rs orientation: forward

Symbol	Name	Function Class
Gm9946	predicted gene 9946	within coordinates
Rr637332	regulatory region 637332	within coordinates