rs36567568 SNP Detail

Summary

• ID
  rs36567568
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:120681359 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTACCTGGG TAGGAGAGGA
  AGTGAAGCCA AGAGGGACAG AGTGACAGTG TGTAGGGAAA ACTCACACAC TAAGCTCTAA
  GAACACATTT TCCTGCACAA CTTGGACCCT GAAGAAAAGT CCCAGGGAAG TCAGTCTCAC
  TCTGTACACC TCTGTGCACT AGGATTTAGG CACAAAAATA ATAAGAAAAA GTGCTGTAGA
  R
  TAGTTAAACT ATATGTTATG ATTTTGCTTA AGAGAGGTAA GAAATAGAAA GGGAAGCCAA
  GAAGTGATGG TGCACGCCAT TAATCCCAGC ACTTGGGAGG CAGAGGCAGG TGGATTTCTG
  AGTTTGAGGC CAGCCTGGTC TACAGAGTGA GTTCTAGGAC AACCAGGTCT ACACAGAGAA
  ACCCTGTCTT GAAAAACGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	WSB/EiJ
ss51608864	NES14656102	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	WSB/EiJ
rs36567568					SNP	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51608864	NES14656102	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:120681359 () rs orientation: forward

Symbol	Name	Function Class
6530403H02Rik	RIKEN cDNA 6530403H02 gene	626 bp upstream
Rr583992	regulatory region 583992	1149 bp distal
Rr583993	regulatory region 583993	722 bp distal
Tssr35394	transcription start site region 35394	964 bp upstream