rs36363046 SNP Detail

Summary

• ID
  rs36363046
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:128645366 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACCAAATG TGCCTGTGAT
  AAAAGCAAAT TAAGCATTTT TTCCTACTAA AAACACTAGC AAAATTTTAT GTTTAGTGTG
  CTCCTCTGCA GTGCAATATG ATCTTCAGAC CGTCAGTTCC ATTGAGCTCA AGTTATGATA
  ACAATAACTT TTGCAGATGT TCATAGCTGT CAAATATTAT TCTCGAAAAT GTCAAAGAGT
  R
  TGATTAAAAA GTAAAGCAGA GAAATTATTC TAAAGTAATT GGTCGAAGTC AACAAGGCGA
  GGGAAGGTCA AACGTTAGTG CTTTACCCAC AAACCGTGAA TGAACTGGAG AAATATCACA
  GCTCCCCGGA TTTTTCTTAA AGAGGAAAAT AACTGTGTGC TGCATAGGTG GACCCACAAG
  AACGTGGGTG TTTGCACATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51619085	NES14653551	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36363046					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51619085	NES14653551	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:128645366 () rs orientation: forward

Symbol	Name	Function Class
Gm43824	predicted gene 43824	within coordinates
Rr497	regulatory region 497	within coordinates
Rr584947	regulatory region 584947	852 bp distal