rs36276383 SNP Detail

Summary

• ID
  rs36276383
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:101039562 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCGAGGCCAT GCCCGCTCCT
  CACATCTGTG AGCAGAGTGT GTGGACAGTT ACCGTTGGCT ACTGCAAATG TCAGGGCCAT
  ATGAACTCAA AGAAGAAGGA ATTATTGGTC CCAGAAAAGA GGGGAAAAGA ATGCCAGTCA
  GCGGATACAT GTACATGAGT GCACACACAC ACACACACAA TTTAAAAACA AAAAGGAATA
  Y
  ATAATCTCTA CTATTCCATA GCTCTGTGAG TTTTGGTTTT GTTTTGTTTT GTTTTGTTTT
  GTATTTTACA TATCCTTTTG CACATATGAT TTCTTATATC TTTGTTACTA AGTGCTATGT
  GATGCTTCTT TTGGTATATG TCGGGAACAC ACAAAATACA GTCAGGCAGT GACCAGAGCC
  TGGGAACGTG GACTCGGGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51390353	NES13730593	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36276383					SNP	T	T	T	T	T	T	C	T	T	T	C	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51390353	NES13730593	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:101039562 () rs orientation: forward

Symbol	Name	Function Class
Gm43948	predicted gene, 43948	within coordinates
Gm43950	predicted gene, 43950	within coordinates
Rr635751	regulatory region 635751	1453 bp proximal